miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|261660053|gb|FS087507.1|FS087507 AAGTGCTATTGATATTTTGAAGAACTGTTTGTTTGATAGATTCAGCAACAATGGCAGACCTCCTCTCCAACTATTCAAGC
AAATTAGAAGCAGTTCCTCCAAGTCACTGCTTGCCATTGCACGAAAGACCAGTGGATCCAGTTGAAATTGTGAACACTAT
TCCAGTAATTGATTTGGGAAAAGCTAAGGGGGATGAACGACCTGCTGTCGTTCAACAACTTATGAAAGCTTTTGAAGAAT
ATGGGTTTTTTCAGATAATCAATCATGGAGTACCCGAAAAATTGATGGAAGAGGCAATGAAAGTGTACAAGGAATTTTTC
AGTCTGCCAGCGGAAGAAAAAGAGAGATATGCAAAGGATGCAGCAAATAATACAGCAACAGGTGCAGCGAAAATGTACAG
TAGCAGTGCCAAGCATTATGATTCAGAGGAGCATCGATACTGGAGGGATGTGTTGGAACATAGCGCCAATCTTGACGGGA
AAGACAGAGAAACTTGGCCTGATAAGCCTTCAAGATATAGGGAGGTTATTGGTGAATATTCAGATGAATTGAGAAGGGTG
AGTAAGGTCATCCTGGGTATGGTAGCTGAAGGGCTAGGGTTGGAGCCAGGGTTCTTTGACAAAGAACTTGGGCAGAGAAT
GCTTGTGAATCACTATCCAGCATGCCCAGATCCAAGTTTAACCTTGGGAGTTGGTGGACACTGTGATCCTAATCTCATAA
CCATTATTCAACAAGAGGTCTATGGTCTTC




Most similar to sp|P24397|HY6H_HYONI

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P24397|HY6H_HYONI Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger
           GN=H6H PE=1 SV=1
          Length = 344

 Score =  196 bits (498), Expect = 1e-49
 Identities = 110/240 (45%), Positives = 155/240 (64%), Gaps = 7/240 (2%)
 Frame = +3

Query: 51  MADLLSNYSSKLEAVPPSHCLPLHERPVDPVEIVNTIPVIDLGKAKGDERPAVVQQLMKA 230
           MA  +SN+S+K  +V  S   PL +R    V + N +P+IDL +        +VQQ+ KA
Sbjct: 1   MATFVSNWSTK--SVSESFIAPLQKRAEKDVPVGNDVPIIDLQQ----HHHLLVQQITKA 54

Query: 231 FEEYGFFQIINHGVPEKLMEEAMKVYKEFFSLPAEEKERYAK--DAA--NNTATGAAKMY 398
            +++G FQ+INHG PE+LM E M+V KEFF+LPAEEKE++    +AA         AK+Y
Sbjct: 55  CQDFGLFQVINHGFPEELMLETMEVCKEFFALPAEEKEKFKPKGEAAKFELPLEQKAKLY 114

Query: 399 SSSAKHYDSEEHRYWRDVLEHSAN-LDGKDRETWPDKPSRYREVIGEYSDELRRVSKVIL 575
               +   +EE  YW+D L H  + LD     +WP+KP++YREV+ +YS E+R+++  +L
Sbjct: 115 -VEGEQLSNEEFLYWKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRML 173

Query: 576 GMVAEGLGLEPGFFDKELG--QRMLVNHYPACPDPSLTLGVGGHCDPNLITIIQQEVYGL 749
             + EGLGL+ G+FD EL   Q ML N+YP CPDPS TLG GGH D NLIT++QQ++ GL
Sbjct: 174 DYICEGLGLKLGYFDNELSQIQMMLTNYYPPCPDPSSTLGSGGHYDGNLITLLQQDLPGL 233